Index

A

AIC_bst (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) amplitudes (hermes_rheo.transforms.recovery_rheology.RecoveryRheologyResult attribute) apply_to() (hermes_rheo.transforms.fit_model.FitModel method) (hermes_rheo.transforms.shift_factor_models.ShiftFactorModel method) ArrheniusModel (class in hermes_rheo.transforms.shift_factor_models)

AutomatedMasterCurve (class in hermes_rheo.transforms.automated_mastercurve) available_quantities (hermes_rheo.transforms.automated_mastercurve.MasterCurveSet property) average_over_all() (hermes_rheo.transforms.owchirp_analysis.OWChirpAnalysis static method) average_over_chirp() (hermes_rheo.transforms.owchirp_analysis.OWChirpAnalysis static method) average_until_tw() (hermes_rheo.transforms.owchirp_analysis.OWChirpAnalysis static method)

C

calculate_wave_parameters() (hermes_rheo.transforms.owchirp_analysis.OWChirpAnalysis static method) change_ref() (hermes_rheo.transforms.automated_mastercurve.MasterCurveMeasurement method) complex_modulus() (hermes_rheo.lve_models.FractionalKelvinVoigtModel method) (hermes_rheo.lve_models.FractionalMaxwellGelModel method) (hermes_rheo.lve_models.FractionalMaxwellLiquidModel method) (hermes_rheo.lve_models.FractionalMaxwellModel method) (hermes_rheo.lve_models.FractionalZenerModel method) (hermes_rheo.lve_models.JeffreysModel method) (hermes_rheo.lve_models.KelvinVoigtModel method) (hermes_rheo.lve_models.LVEModel method) (hermes_rheo.lve_models.MaxwellModel method) (hermes_rheo.lve_models.MultiModeMaxwellModel method) (hermes_rheo.lve_models.SpringPotModel method)

CompositeMasterCurve (class in hermes_rheo.transforms.automated_mastercurve) config (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) creep() (hermes_rheo.lve_models.JeffreysModel method) (hermes_rheo.lve_models.KelvinVoigtModel method) (hermes_rheo.lve_models.LVEModel method) (hermes_rheo.lve_models.MaxwellModel method) (hermes_rheo.lve_models.MultiModeMaxwellModel method) (hermes_rheo.lve_models.Protocols static method) (hermes_rheo.lve_models.SpringPotModel method)

D

data (hermes_rheo.visualization.owchirp.OWChirpVisualizer property) data_from_filepath() (hermes_rheo.file_readers.trios_rheo_txt.TriosRheoReader method) DATA_HEADER_REGEX (hermes_rheo.file_readers.trios_rheo_txt.TriosRheoReader attribute) dataset (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) (hermes_rheo.transforms.temperature_ramp_analysis.TemperatureRampResult attribute) dataset_continuous (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) dataset_discrete (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) decomp_waveform (hermes_rheo.transforms.recovery_rheology.RecoveryRheologyResult attribute)

default_mode (hermes_rheo.file_readers.rheo_compass_csv.RheoCompassReader property) (hermes_rheo.file_readers.trios_rheo_txt.TriosRheoReader property) delta_a1_proc (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) delta_a1_raw (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) delta_a2_proc (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) delta_a2_raw (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) dH (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) domain (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) dtau (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute)

E

encoding (hermes_rheo.file_readers.trios_rheo_txt.TriosRheoReader property) eta (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) eta10_fit (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) eta1_exp (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) eta1_interpdata (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute)

eta1_proc (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) eta2_exp (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) eta2_interpdata (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) eta2_proc (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) experiment_set() (hermes_rheo.lve_models.Protocols static method) extracted_dataset (hermes_rheo.transforms.temperature_ramp_analysis.TemperatureRampResult attribute)

F

filter_signal() (hermes_rheo.transforms.owchirp_analysis.OWChirpAnalysis method) find_tan_delta_peaks() (in module hermes_rheo.transforms.temperature_ramp_analysis) fit() (hermes_rheo.transforms.fit_model.MultiModeMaxwellModel method) (hermes_rheo.transforms.shift_factor_models.ArrheniusModel method) (hermes_rheo.transforms.shift_factor_models.WLFModel method) FitModel (class in hermes_rheo.transforms.fit_model)

FractionalKelvinVoigtModel (class in hermes_rheo.lve_models) FractionalMaxwellGelModel (class in hermes_rheo.lve_models) FractionalMaxwellLiquidModel (class in hermes_rheo.lve_models) FractionalMaxwellModel (class in hermes_rheo.lve_models) FractionalZenerModel (class in hermes_rheo.lve_models) FrequencyToTime (class in hermes_rheo.transforms.frequency_to_time) FrequencyToTimeResult (class in hermes_rheo.transforms.frequency_to_time)

G

g (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) G0 (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) G0_disc (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) G_eta1 (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) G_eta2 (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) G_fit_cont (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute)

G_fit_disc (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) G_threshold_const (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) get_mastercurve() (hermes_rheo.transforms.automated_mastercurve.MasterCurveSet method) glassy_line (hermes_rheo.transforms.temperature_ramp_analysis.StorageModulusOnset attribute) glassy_range (hermes_rheo.transforms.temperature_ramp_analysis.StorageModulusOnset attribute) grid (hermes_rheo.transforms.kymograph.KymographResult property)

H

H (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) h (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) H_lam (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) heights (hermes_rheo.transforms.temperature_ramp_analysis.TanDeltaPeaks attribute) hermes_rheo.file_readers.rheo_compass_csv module hermes_rheo.file_readers.trios_rheo_txt module hermes_rheo.lve_models module hermes_rheo.transforms.automated_mastercurve module hermes_rheo.transforms.fit_model module hermes_rheo.transforms.frequency_to_time module hermes_rheo.transforms.kymograph module hermes_rheo.transforms.mutation_number module hermes_rheo.transforms.owchirp_analysis module hermes_rheo.transforms.owchirp_generation module hermes_rheo.transforms.recovery_rheology module

hermes_rheo.transforms.relaxation_spectrum module hermes_rheo.transforms.rheo_analysis module hermes_rheo.transforms.shift_factor_models module hermes_rheo.transforms.split_temperature_sweep module hermes_rheo.transforms.states_to_conditions module hermes_rheo.transforms.temperature_ramp_analysis module hermes_rheo.visualization.mastercurve module hermes_rheo.visualization.mutation module hermes_rheo.visualization.owchirp module hermes_rheo.visualization.spectrum module hermes_rheo.visualization.style module hermes_rheo.visualization.temperature_ramp module hermes_rheo.visualization.visualize module hparams (hermes_rheo.transforms.automated_mastercurve.MasterCurveMeasurement property)

I

inflection_line (hermes_rheo.transforms.temperature_ramp_analysis.StorageModulusOnset attribute)

invert_laplace() (in module hermes_rheo.lve_models)

J

JeffreysModel (class in hermes_rheo.lve_models)

K

KelvinVoigtModel (class in hermes_rheo.lve_models)

Kymograph (class in hermes_rheo.transforms.kymograph) KymographResult (class in hermes_rheo.transforms.kymograph)

L

lam (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) lam_C (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute)

log_modulus (hermes_rheo.transforms.temperature_ramp_analysis.StorageModulusOnset attribute) log_P (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) LVEModel (class in hermes_rheo.lve_models)

M

MasterCurveMeasurement (class in hermes_rheo.transforms.automated_mastercurve) MasterCurveSet (class in hermes_rheo.transforms.automated_mastercurve) maxwell_G0 (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) maxwell_Gtail (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) maxwell_tail_available (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) maxwell_tau (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) maxwell_ttail (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) maxwell_wcross (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) MaxwellModel (class in hermes_rheo.lve_models) metadata (hermes_rheo.transforms.recovery_rheology.RecoveryRheologyResult attribute) method (hermes_rheo.transforms.recovery_rheology.RecoveryRheologyResult attribute) mod_fft (hermes_rheo.transforms.recovery_rheology.RecoveryRheologyResult attribute) model (hermes_rheo.transforms.shift_factor_models.ArrheniusModel attribute) (hermes_rheo.transforms.shift_factor_models.WLFModel attribute) model_fit_object (hermes_rheo.transforms.fit_model.FitModel property) model_fit_params (hermes_rheo.transforms.fit_model.FitModel property) model_fit_plot (hermes_rheo.transforms.fit_model.FitModel property) module hermes_rheo.file_readers.rheo_compass_csv hermes_rheo.file_readers.trios_rheo_txt hermes_rheo.lve_models hermes_rheo.transforms.automated_mastercurve hermes_rheo.transforms.fit_model hermes_rheo.transforms.frequency_to_time hermes_rheo.transforms.kymograph hermes_rheo.transforms.mutation_number hermes_rheo.transforms.owchirp_analysis hermes_rheo.transforms.owchirp_generation hermes_rheo.transforms.recovery_rheology hermes_rheo.transforms.relaxation_spectrum hermes_rheo.transforms.rheo_analysis hermes_rheo.transforms.shift_factor_models hermes_rheo.transforms.split_temperature_sweep hermes_rheo.transforms.states_to_conditions hermes_rheo.transforms.temperature_ramp_analysis hermes_rheo.visualization.mastercurve hermes_rheo.visualization.mutation hermes_rheo.visualization.owchirp hermes_rheo.visualization.spectrum hermes_rheo.visualization.style hermes_rheo.visualization.temperature_ramp hermes_rheo.visualization.visualize

moduli_owchirp_strain_controlled() (hermes_rheo.transforms.owchirp_analysis.OWChirpAnalysis static method) moduli_owchirp_stress_controlled_IC() (hermes_rheo.transforms.owchirp_analysis.OWChirpAnalysis static method) mrae_eta1 (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) mrae_eta2 (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) MultiModeMaxwellModel (class in hermes_rheo.lve_models) (class in hermes_rheo.transforms.fit_model) MutationNumber (class in hermes_rheo.transforms.mutation_number) MutationNumberMeasurementSet (class in hermes_rheo.transforms.mutation_number)

N

N_bst (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute)

N_opt (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute)

O

omega (hermes_rheo.transforms.recovery_rheology.RecoveryRheologyResult attribute) omega_exp (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute)

OWChirpAnalysis (class in hermes_rheo.transforms.owchirp_analysis) OWChirpGeneration (class in hermes_rheo.transforms.owchirp_generation) OWChirpVisualizer (class in hermes_rheo.visualization.owchirp)

P

pair_indices (hermes_rheo.transforms.recovery_rheology.RecoveryRheologyResult attribute) parse_value_with_prefix() (hermes_rheo.transforms.owchirp_analysis.OWChirpAnalysis static method) plot() (hermes_rheo.transforms.automated_mastercurve.MasterCurveMeasurement method) (hermes_rheo.transforms.fit_model.FitModel method) (hermes_rheo.transforms.kymograph.KymographResult method) (hermes_rheo.transforms.shift_factor_models.ShiftFactorModel method) plot_cole_cole() (in module hermes_rheo.visualization.visualize) plot_fourier() (hermes_rheo.visualization.owchirp.OWChirpVisualizer method) plot_lissajous() (hermes_rheo.transforms.recovery_rheology.RecoveryRheologyResult method) plot_master_curve() (in module hermes_rheo.visualization.mastercurve) plot_mutation_number() (in module hermes_rheo.visualization.mutation) plot_onset() (hermes_rheo.transforms.temperature_ramp_analysis.TemperatureRampMeasurement method) plot_relaxation_spectrum() (in module hermes_rheo.visualization.spectrum) plot_slice_at_x() (hermes_rheo.transforms.kymograph.KymographResult method) plot_slice_at_y() (hermes_rheo.transforms.kymograph.KymographResult method) plot_spectrum_diagnostics() (in module hermes_rheo.visualization.spectrum) plot_step_results() (hermes_rheo.transforms.recovery_rheology.RecoveryRheologyResult method) plot_tg_onset() (in module hermes_rheo.visualization.temperature_ramp) plot_transient() (hermes_rheo.transforms.recovery_rheology.RecoveryRheologyResult method)

plot_vgp() (in module hermes_rheo.visualization.visualize) plot_wave() (hermes_rheo.visualization.owchirp.OWChirpVisualizer method) plot_waves() (hermes_rheo.visualization.owchirp.OWChirpVisualizer method) predict() (hermes_rheo.transforms.fit_model.MultiModeMaxwellModel method) (hermes_rheo.transforms.shift_factor_models.ArrheniusModel method) (hermes_rheo.transforms.shift_factor_models.ShiftFactorModel method) (hermes_rheo.transforms.shift_factor_models.WLFModel method) prepare_owchirp_data() (hermes_rheo.transforms.owchirp_analysis.OWChirpAnalysis static method) primary (hermes_rheo.transforms.temperature_ramp_analysis.TanDeltaPeaks attribute) print_error() (hermes_rheo.transforms.fit_model.FitModel method) (hermes_rheo.transforms.fit_model.MultiModeMaxwellModel method) print_parameters() (hermes_rheo.transforms.fit_model.FitModel method) (hermes_rheo.transforms.fit_model.MultiModeMaxwellModel method) (hermes_rheo.transforms.owchirp_generation.OWChirpGeneration method) (hermes_rheo.transforms.shift_factor_models.ArrheniusModel method) (hermes_rheo.transforms.shift_factor_models.ShiftFactorModel method) (hermes_rheo.transforms.shift_factor_models.WLFModel method) prominences (hermes_rheo.transforms.temperature_ramp_analysis.TanDeltaPeaks attribute) properties (hermes_rheo.transforms.temperature_ramp_analysis.TemperatureRampAnalysis attribute) Protocols (class in hermes_rheo.lve_models)

R

raw_mod (hermes_rheo.transforms.recovery_rheology.RecoveryRheologyResult attribute) recov_anal_data (hermes_rheo.transforms.recovery_rheology.RecoveryRheologyResult attribute) RecoveryRheology (class in hermes_rheo.transforms.recovery_rheology) RecoveryRheologyMeasurementSet (class in hermes_rheo.transforms.recovery_rheology) RecoveryRheologyResult (class in hermes_rheo.transforms.recovery_rheology) RelaxationSpectrum (class in hermes_rheo.transforms.relaxation_spectrum) RelaxationSpectrumResult (class in hermes_rheo.transforms.relaxation_spectrum) reset_style() (in module hermes_rheo.visualization.style)

result (hermes_rheo.transforms.frequency_to_time.FrequencyToTime property) (hermes_rheo.transforms.recovery_rheology.RecoveryRheologyMeasurementSet attribute) (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrum property) (hermes_rheo.transforms.temperature_ramp_analysis.TemperatureRampAnalysis attribute) (hermes_rheo.transforms.temperature_ramp_analysis.TemperatureRampMeasurement property) RheoAnalysis (class in hermes_rheo.transforms.rheo_analysis) RheoCompassReader (class in hermes_rheo.file_readers.rheo_compass_csv) rho (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute)

S

s (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) saos() (hermes_rheo.lve_models.LVEModel method) (hermes_rheo.lve_models.Protocols static method) save_frames() (hermes_rheo.visualization.owchirp.OWChirpVisualizer method) select_best_filter_method() (hermes_rheo.transforms.owchirp_analysis.OWChirpAnalysis method) ShiftFactorModel (class in hermes_rheo.transforms.shift_factor_models) slice_at_x() (hermes_rheo.transforms.kymograph.KymographResult method) slice_at_y() (hermes_rheo.transforms.kymograph.KymographResult method) slope (hermes_rheo.transforms.temperature_ramp_analysis.StorageModulusOnset attribute) split_by_temperature() (hermes_rheo.transforms.split_temperature_sweep.SplitTemperatureSweep method) SplitTemperatureSweep (class in hermes_rheo.transforms.split_temperature_sweep) SpringPotModel (class in hermes_rheo.lve_models) states (hermes_rheo.transforms.automated_mastercurve.MasterCurveMeasurement property) StatesToConditions (class in hermes_rheo.transforms.states_to_conditions)

steps_to_merge (hermes_rheo.transforms.temperature_ramp_analysis.TemperatureRampAnalysis attribute) storage_modulus_onset() (in module hermes_rheo.transforms.temperature_ramp_analysis) StorageModulusOnset (class in hermes_rheo.transforms.temperature_ramp_analysis) stress_relaxation() (hermes_rheo.lve_models.FractionalKelvinVoigtModel method) (hermes_rheo.lve_models.JeffreysModel method) (hermes_rheo.lve_models.KelvinVoigtModel method) (hermes_rheo.lve_models.LVEModel method) (hermes_rheo.lve_models.MaxwellModel method) (hermes_rheo.lve_models.MultiModeMaxwellModel method) (hermes_rheo.lve_models.Protocols static method) (hermes_rheo.lve_models.SpringPotModel method) summary() (hermes_rheo.transforms.temperature_ramp_analysis.TemperatureRampMeasurement method) supported_extensions (hermes_rheo.file_readers.rheo_compass_csv.RheoCompassReader attribute) (hermes_rheo.file_readers.trios_rheo_txt.TriosRheoReader attribute)

T

t_inflection (hermes_rheo.transforms.temperature_ramp_analysis.StorageModulusOnset attribute) t_report (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) TanDeltaPeaks (class in hermes_rheo.transforms.temperature_ramp_analysis) tau (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute) temperature (hermes_rheo.transforms.temperature_ramp_analysis.StorageModulusOnset attribute) TemperatureRampAnalysis (class in hermes_rheo.transforms.temperature_ramp_analysis) TemperatureRampMeasurement (class in hermes_rheo.transforms.temperature_ramp_analysis) TemperatureRampResult (class in hermes_rheo.transforms.temperature_ramp_analysis) temperatures (hermes_rheo.transforms.temperature_ramp_analysis.TanDeltaPeaks attribute) tg (hermes_rheo.transforms.temperature_ramp_analysis.TanDeltaPeaks property) (hermes_rheo.transforms.temperature_ramp_analysis.TemperatureRampResult attribute) tg_onset (hermes_rheo.transforms.temperature_ramp_analysis.StorageModulusOnset attribute) tg_values (hermes_rheo.transforms.temperature_ramp_analysis.TemperatureRampMeasurement property) (hermes_rheo.transforms.temperature_ramp_analysis.TemperatureRampResult attribute)

to_dict() (hermes_rheo.transforms.recovery_rheology.RecoveryRheologyResult method) to_excel() (hermes_rheo.transforms.automated_mastercurve.MasterCurveMeasurement method) (hermes_rheo.transforms.kymograph.KymographResult method) (hermes_rheo.transforms.recovery_rheology.RecoveryRheologyResult method) (hermes_rheo.transforms.temperature_ramp_analysis.TemperatureRampMeasurement method) (hermes_rheo.transforms.temperature_ramp_analysis.TemperatureRampResult method) to_measurement() (hermes_rheo.lve_models.LVEModel method) (hermes_rheo.transforms.kymograph.KymographResult method) to_txt() (hermes_rheo.transforms.owchirp_generation.OWChirpGeneration method) to_video() (hermes_rheo.visualization.owchirp.OWChirpVisualizer method) trad_mod (hermes_rheo.transforms.recovery_rheology.RecoveryRheologyResult attribute) TriosRheoReader (class in hermes_rheo.file_readers.trios_rheo_txt)

U

use_science_style() (in module hermes_rheo.visualization.style)

use_temps (hermes_rheo.transforms.temperature_ramp_analysis.TemperatureRampAnalysis attribute)

V

visualize() (hermes_rheo.transforms.mutation_number.MutationNumberMeasurementSet method) (hermes_rheo.transforms.owchirp_generation.OWChirpGeneration method)

vparams (hermes_rheo.transforms.automated_mastercurve.MasterCurveMeasurement property)

W

W_interpdata (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) W_proc (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute)

W_raw (hermes_rheo.transforms.frequency_to_time.FrequencyToTimeResult attribute) WLFModel (class in hermes_rheo.transforms.shift_factor_models) wt_base (hermes_rheo.transforms.relaxation_spectrum.RelaxationSpectrumResult attribute)

X

X_VALUES_COLUMN_LABEL (hermes_rheo.file_readers.trios_rheo_txt.TriosRheoReader attribute)

xtransformed (hermes_rheo.transforms.automated_mastercurve.MasterCurveMeasurement property)

Y

Y_VALUES_COLUMN_LABEL (hermes_rheo.file_readers.trios_rheo_txt.TriosRheoReader attribute)

Y_VALUES_COLUMN_LABELS (hermes_rheo.file_readers.trios_rheo_txt.TriosRheoReader attribute) ytransformed (hermes_rheo.transforms.automated_mastercurve.MasterCurveMeasurement property)